Index

A

absorbance_plot() (in module pyeem.plots)

Aqualog (class in pyeem.instruments.horiba)

B

blank_subtraction() (in module pyeem.preprocessing.corrections)

C

calibration() (in module pyeem.preprocessing) calibration_curves_plot() (in module pyeem.plots) calibration_summary_info() (in module pyeem.preprocessing) Cary4E (class in pyeem.instruments.agilent) CaryEclipse (class in pyeem.instruments.agilent) create_metadata_template() (in module pyeem.datasets)

create_mixture_spectra() (in module pyeem.augmentation) create_model() (pyeem.analysis.models.RutherfordNet method) create_prototypical_spectra() (in module pyeem.augmentation) create_routine() (in module pyeem.preprocessing) create_single_source_spectra() (in module pyeem.augmentation) crop() (in module pyeem.preprocessing.filters)

D

data_dir (pyeem.datasets.Dataset attribute) Dataset (class in pyeem.datasets)

dilution() (in module pyeem.preprocessing.corrections) discrete_excitations() (in module pyeem.preprocessing.filters) download_demo() (in module pyeem.datasets)

E

eem_plot() (in module pyeem.plots)

F

fill_missing_values() (in module pyeem.preprocessing.filters)

fluorescence_regional_integration() (in module pyeem.analysis.basic) Fluorolog (class in pyeem.instruments.horiba)

G

gaussian_smoothing() (in module pyeem.preprocessing.filters) get_supported_instruments() (in module pyeem.instruments)

get_test_data() (pyeem.analysis.models.RutherfordNet method) get_training_data() (pyeem.analysis.models.RutherfordNet method)

I

inner_filter_effect() (in module pyeem.preprocessing.corrections)

L

load_absorbance() (pyeem.instruments.agilent.Cary4E static method) (pyeem.instruments.agilent.CaryEclipse static method) (pyeem.instruments.horiba.Aqualog static method) (pyeem.instruments.horiba.Fluorolog static method) (pyeem.instruments.tecan.Spark static method) load_eem() (pyeem.instruments.agilent.Cary4E static method) (pyeem.instruments.agilent.CaryEclipse static method) (pyeem.instruments.horiba.Aqualog static method) (pyeem.instruments.horiba.Fluorolog static method) (pyeem.instruments.tecan.Spark static method) load_metadata() (pyeem.datasets.Dataset method)

load_sample_sets() (pyeem.datasets.Dataset method) load_spectral_corrections() (pyeem.instruments.agilent.Cary4E static method) (pyeem.instruments.agilent.CaryEclipse static method) (pyeem.instruments.horiba.Aqualog static method) (pyeem.instruments.horiba.Fluorolog static method) (pyeem.instruments.tecan.Spark static method) load_water_raman() (pyeem.instruments.agilent.Cary4E static method) (pyeem.instruments.agilent.CaryEclipse static method) (pyeem.instruments.horiba.Aqualog static method) (pyeem.instruments.horiba.Fluorolog static method) (pyeem.instruments.tecan.Spark static method)

M

manufacturer (pyeem.instruments.agilent.Cary4E attribute) (pyeem.instruments.agilent.CaryEclipse attribute) (pyeem.instruments.horiba.Aqualog attribute) (pyeem.instruments.horiba.Fluorolog attribute) (pyeem.instruments.tecan.Spark attribute) metadata_path (pyeem.datasets.Dataset attribute) metadata_summary_info() (pyeem.datasets.Dataset method) mixture_animation() (in module pyeem.plots) model_history_plot() (in module pyeem.plots) module pyeem.analysis.basic pyeem.analysis.models pyeem.augmentation pyeem.datasets pyeem.instruments pyeem.instruments.agilent pyeem.instruments.horiba pyeem.instruments.tecan pyeem.plots pyeem.preprocessing pyeem.preprocessing.corrections pyeem.preprocessing.filters

N

name (pyeem.instruments.agilent.Cary4E attribute) (pyeem.instruments.agilent.CaryEclipse attribute) (pyeem.instruments.horiba.Aqualog attribute) (pyeem.instruments.horiba.Fluorolog attribute) (pyeem.instruments.tecan.Spark attribute)

P

perform_routine() (in module pyeem.preprocessing) prediction_parity_plot() (in module pyeem.plots) prepare_data() (pyeem.analysis.models.RutherfordNet method) preprocessing_routine_plot() (in module pyeem.plots) prototypical_spectra_plot() (in module pyeem.plots) pyeem.analysis.basic module pyeem.analysis.models module pyeem.augmentation module pyeem.datasets module pyeem.instruments module

pyeem.instruments.agilent module pyeem.instruments.horiba module pyeem.instruments.tecan module pyeem.plots module pyeem.preprocessing module pyeem.preprocessing.corrections module pyeem.preprocessing.filters module

R

raman_normalization() (in module pyeem.preprocessing.corrections)

RutherfordNet (class in pyeem.analysis.models)

S

scan_sets_subdir (pyeem.datasets.Dataset attribute) scatter_removal() (in module pyeem.preprocessing.corrections) single_source_animation() (in module pyeem.plots) Spark (class in pyeem.instruments.tecan)

supported_models (pyeem.instruments.agilent.Cary4E attribute) (pyeem.instruments.agilent.CaryEclipse attribute) (pyeem.instruments.horiba.Aqualog attribute) (pyeem.instruments.horiba.Fluorolog attribute) (pyeem.instruments.tecan.Spark attribute)

T

train() (pyeem.analysis.models.RutherfordNet method)

W

water_raman_peak_animation() (in module pyeem.plots)

water_raman_peak_plot() (in module pyeem.plots) water_raman_timeseries() (in module pyeem.plots)